ONCO/Reveal™
Dx 肺癌及結直腸癌基因診斷檢測
什麼是 Dx 肺癌和結腸癌基因診斷檢測?
這是一項以新一代測序為基礎的測試,用於檢測來自福爾馬林固定石蠟包埋 (FFPE) 非小細胞肺癌 (NSCLC) 和結腸直腸癌 (CRC) 腫瘤組織 DNA 中的體變異。
本測試擬用於根據已核准的治療產品標籤,選擇可能受益於表 1 所列靶向療法治療的 NSCLC 或 CRC 患者。
表格1. 可用標靶藥物的基因變異
|
適用於
|
基因
|
變異體
|
標靶藥物
|
|---|---|---|---|
|
結直腸癌 (CRC)
|
KRAS
|
野生型KRAS (密碼子12和13沒有出現突變)
|
Erbitux® (cetuximab), or Vectibix® (panitumumab)
|
|
非小細胞肺癌 (NSCLC)
|
EGFR
|
外顯子 19 缺失 外顯子 21突變 L858R
|
Tarceva® (erlotinib), Gilotrif® (afatinib), Iressa®(gefitinib), or Vizimpro® (dacomitinib)
|
大多數的肺癌 (~85%) 都歸類為非小細胞肺癌 (NSCLC)。[4] 近一半的 NSCLC 病例與點突變或 EGFR 等其他生物標記有關。這些生物標誌物的流行率因種族而異。亞洲 NSCLC 患者的 EGFR 基因突變比例 (30-40%) 遠高於美國和歐洲的 NSCLC 患者 (10-15%)。[1]
non-small cell lung cancer (NSCLC)
85%
35-40% of patients with CRC found activating mutations in KRAS
10-15%
The proportion of EGFR mutations
30-40%
[1] Ellison, G., Zhu, G., Moulis, A., Dearden, S., Speake, G., & McCormack, R. (2012). EGFR mutation testing in lung cancer: a review of available methods and their use for analysis of tumour tissue and cytology samples. Journal of Clinical Pathology, 66(2), 79–89. https://doi.org/10.1136/jclinpath-2012-201194
大約有 35-40% 的 CRC 患者發現 KRAS 有活化突變。因此,KRAS 基因突變狀態可作為抗 EGFR 靶向治療反應的預測生物標記。目前已有有力證據顯示,西妥昔單抗 (cetuximab) 和帕尼妥單抗 (panitumumab) 對腫瘤帶有野生型 KRAS 基因的 CRC 患者有效。 [2]
Patients with CRC found activating mutations in KRAS
35-40%
[1] Ellison, G., Zhu, G., Moulis, A., Dearden, S., Speake, G., & McCormack, R. (2012). EGFR mutation testing in lung cancer: a review of available methods and their use for analysis of tumour tissue and cytology samples. Journal of Clinical Pathology, 66(2), 79–89. https://doi.org/10.1136/jclinpath-2012-201194
目標
確認 NSCLC / CRC 患者是否有 KRAS 或 EGFR 基因突變
Table 2. List of Variants with Established Analytical Performance Only
| 基因 | Variant ID | Cancer | Nucleotide Change |
| EGFR | T790M | NSCLC | c.2369C>T |
| EGFR | G719A | NSCLC | c.2156G>C |
| EGFR | G719C | NSCLC | c.2154_2155delinsTT; c.2155G>T |
| EGFR | G719D | NSCLC | c.2156G>A |
| EGFR | G719S | NSCLC | c.2155G>A |
| EGFR | Exon 20 Inframe Insertions | NSCLC | Multiple |
| BRAF | V600E | NSCLC | c.1799T>A; c.1799_1800delinsAA |
| KRAS | Exon 2 Mutation | NSCLC | Multiple |
| KRAS | A59E | CRC | c.176C>A |
| KRAS | A59G | CRC | c.176C>G |
| KRAS | A59T | CRC | c.175G>A |
| KRAS | A59S | CRC | c.175G>T |
| KRAS | Q61E | CRC | c.181C>G |
| KRAS | Q61H | CRC | c.183A>C; c.183A>T |
| KRAS | Q61K | CRC | c.180_181delinsAA; c.180_181inv; c.181C>A |
| KRAS | Q61L | CRC | c.182A>T; c.182_183delinsTC; c.182_183delinsTG; c.182_183inv |
| KRAS | Q61R | CRC | c.182A>G; c.182_183delinsGC; c.182_183delinsGT |
| KRAS | K117N | CRC | c.351A>C; c.351A>T |
| KRAS | A146T | CRC | c.436G>A |
| KRAS | A146P | CRC | c.436G>C |
| KRAS | A146V | CRC | c.437C>T |
| BRAF | V600E | CRC | C.1799T>A; c.1799_1800delinsAA |
|
項目
|
Dx 肺癌及結直腸癌基因診斷檢測
|
|---|---|
|
Content
|
KRAS wild type (absence of mutations in codons 12 and 13)
EGFR Exon 19 In Frame Deletions and Exon 21 L858R Substitution Mutations BRAF V600E mutation |
|
Sequencing Platform
|
NGS
|
|
Sequencing Type
|
Amplicon based sequencing
|
|
Variants Type
|
clinically actionable SNVs, indel
|
|
Sample Type
|
FFPE
|
|
TAT
|
7 working days**
|
流程
STEP 01
售前諮詢
STEP 02
簽署同意書、收集福爾馬林固定石蠟包埋(FFPE) 腫瘤組織塊
STEP 03
將樣本送至實驗室
STEP 04
分析實驗數據
STEP 05
共 7 個工作天完成報告**
**Only applicable to the sample that fulfil the QC requirements.